发布于 由admin

PUBLICATIONS

PUBLICATIONS-2023

      1. Zhang, R.#, Huang, Y.#, Li, M., Wang, L., Li, B., Xia, A., Li, Y., Yang, S.*, and Jin, F.*. (2023). High-throughput, microscopy-based screening and quantification of genetic elements. mLife. 2023; 1–12.
      1. Gao, Y.#, Wei, J.#, Fu, S., Xing, X., Zhang, R.* and Jin, F.*. (2023). Remotely Controllable Engineered Bacteria for Targeted Therapy of Pseudomonas aeruginosa Infection. ACS Synth. Biol.
      1. Fu, S.#, Zhang, R.#*, Gao, Y., Xiong, J., Li, Y., Pu, L., Xia, A., and Jin, F.*. (2023). Programming the lifestyles of engineered bacteria for cancer therapy. Natl. Sci. Rev., nwad03.
      1. Cao, Z.#, Zuo, W.#, Wang, L., Chen, J., Qu, Z., Jin, F., and Dai, L*. (2023) Spatial profiling of microbial communities by sequential FISH with error-robust encoding, Nat. Commun., 14, 1477.
      1. 付生伟, 金帆*. (2023). 若干裂解基因盒子的表征及应用. 生物工程学报, 39(3): 1142-1162.

PUBLICATIONS-2022

      1. Li, F., Liu, X.-Y., Ni, L.*, and Jin, F.* (2022) AIDmut-Seq: a Three-Step Method for Detecting Protein-DNA Binding Specificity, Microbiol. Spectr., 0, e03783-03722.
      1. Chen, W.#, Zhang, J.#, Li, F.#, Wang, C., Zhang, Y., Xia, A., Ni, L.*, and Jin, F.* (2022) Genome-Wide Analysis of Gene Expression Noise Brought About by Transcriptional Regulation in Pseudomonas aeruginosa, mSystems, 0, e00963-00922.
      1. Xia, A.#, Zhang, R.#, Huang, Y., Ni, L., Pu, L., Li, Y., Yang, S.*, and Jin, F.* (2022) An adaptive tracking illumination system for optogenetic control of single bacterial cells, Appl. Microbiol. Biotechnol.,106, 6775-6784.
      1. Wei, J., and Jin, F.* (2022). Illuminating bacterial behaviors with optogenetics. Curr. Opin. Solid State Mater. Sci., 26, 101023.
      1. 李飞旋, 倪磊*, 金帆*. (2022). 铜绿假单胞菌中快速基因操作工具的开发和应用. 生物工程学报, 1-15.
      1. 陈文辉, 金帆*. (2022). 铜绿假单胞菌中S型绿脓杆菌素与荧光嗜铁素的功能协同性分析. 生物工程学报, 1-26.
      1. 张亭, 冷梦甜, 金帆, 袁海*. (2022). 合成生物研究重大科技基础设施概述. 合成生物学, 3(01):184-194.

PUBLICATIONS-2021

      1. Cheng, X.#, Pu, L.#, Fu, S.#, Xia, A., Huang, S., Ni, L., Xing, X., Yang, S.*, Jin, F.* (2021). Engineering Gac/Rsm Signaling Cascade for Optogenetic Induction of the Pathogenicity Switch in Pseudomonas aeruginosa. ACS Synth. Biol., 10, 6, 1520–1530
      1. Xia, A., Qian, M., Wang, C., Huang, Y., Liu, Z.*, Ni, L*. Jin, F.* (2021). Optogenetic Modification of Pseudomonas aeruginosa Enables Controllable Twitching Motility and Host Infection. ACS Synth. Biol., 10, 3, 531–541.
      1. Wong, GCL., Yang S., Jin, F.* et al.(2021). Roadmap on emerging concepts in the physical biology of bacterial biofilms: from surface sensing to community formation. Phys. Biol., 210.75.253.170.
      1. 杨帅, 金帆*. (2021). 单细菌表型的高通量表征和控制. 科学通报, 66(03):367-383.
      1. 金帆*#, 李奉庭#, 夏霖*. (2021). CRISPR/Cas在定向进化技术中的应用. 集成技术, 10(04):33-49.
      1. 金帆*#, 高艳梅#, 黄亚佳, 蒲璐, 夏霖*. (2021). 铜绿假单胞菌感染治疗现状. 集成技术, 10(04):50-66.
      1. 辛颖#, 徐宝琪#, 王军杰#, 张荣荣#, 温慧, 王金娟, 梁帆, 金帆, 梁卓, 黄建东*, 黄术强*. (2021). 用于高分辨率成像的肺器官芯片构建及肺炎模型应用研究. 集成技术, 10(04):126-136.

PUBLICATIONS-2020

      1. Yang, S., Jin, F.* (2020). Characterization and control of bacterial phenotypes at the single cell level. Chin. Sci. Bull., 65: 1-17.
      1. 蒲璐, 黄亚佳, 杨帅, 金帆* (2020). 合成生物学在感染性疾病防治中的应用. 合成生物学, 1(2): 134-149.
      1. Huang, Y., Yang, S., Chen, W., Li, F., Xia, A., Ni, L.*, Yang G.*, Jin, F.* (2020). A synthetic genetic circuit enables precise quantification of direct repeat deletion in bacteria. ACS Synth. Biol., 9, 1041-1050.
      1. Cheng, Z.#, Xiong, J.#, Min, D., Cheng, L., Liu, D.*, Li, W., Jin, F., Yang, M., Yu H. (2020). Promoting bidirectional extracellular electron transfer of Shewanella oneidensis MR‐1 for hexavalent chromium reduction via elevating intracellular cAMP level. Biotechnol. Bioeng., 117, 1294-1303.

PUBLICATIONS-2019

      1. Wang, C.#, Chen, W.#, Xia, A., Zhang, R., Huang, Y., Yang, S.,Ni, L.*, Jin, F.* (2019). Carbon starvation induces the expression of PprB-regulated genes in Pseudomonas aeruginosa. Appl. Environ. Microbiol., 85: e01705-19.
      1. Han, J.#, Xia, A.#, Huang, Y., Ni, L., Chen, W., Jin, Z., Yang, S.*, Jin, F.* (2019). Simultaneous Visualization of Multiple Gene Expression in Single Cells Using an Engineered Multicolor Reporter Toolbox and Approach of Spectral Crosstalk Correction. ACS Synth. Biol., 8, 2536-2546.
      1. Armbruster, CR., Lee, CK., Parker-Gilham, J., de Anda, J., Xia, A., Zhao, K., Murakami, K., Tseng, BS., Hoffman, LR., Jin, F.*, Harwood, CS., Wong, GCL.*, Parsek MR. * (2019). Heterogeneity in surface sensing suggests a division of labor in Pseudomonas aeruginosa populations. eLife, 8, e45084.
      1. Xia, A.#, Yang, S.#, Zhang, R., Ni, L., Xing, X.*,Jin, F.* (2019).Imaging the Separation Distance between the Attached Bacterial Cells and the Surface with a Total Internal Reflection Dark-Field Microscope. Langmuir, 35, 8860-8866.
      1. Lee, EY., Zhang, C., Di, DJ., Jin, F., Connell W., Hung, M., Malkoff, N., Veksler, V., Gilliet, M., Ren, P., Wong, GCL.* (2019). Helical antimicrobial peptides assemble into protofibril scaffolds that present ordered dsDNA to TLR9. Nat. Commu., 10(1), 1012.
      1. 黄亚佳, 倪磊, 金帆, 杨光*. (2019). 基于高通量显微成像及分析技术的DNA重排研究. 集成技术, 8(06):31-38.

PUBLICATIONS-2018

      1. Xia, A.#, Han, J. #, Ni, L., Yang, S.*, Jin, F.* (2018). Dual-color fluorescent timer enables detection of growth-arrested pathogentic bacterium. ACS Infect. Dis., 4, 1666.
      1. Yang, S.#, Cheng X.#, Jin, Z., Xia, A., Ni, L., Zhang, R., Jin, F.* (2018). Differential production of Psl in planktonic cells leads to two distinctive attaching phenotypes in Pseudomonas aeruginosa. Appl. Environ. Microbiol., 84(14), e00700-18.
      1. Huang, Y.#, Xia, A.#, Yang, G.*, Jin, F.* (2018). Bioprinting Living Biofilms through Optogenetic Manipulation. ACS Synth. Biol., 7, 1195-1200.
      1. Jin, Z.#, Li, J.#, Ni, L., Zhang, R., Xia, A., Jin, F.* (2018). Conditional privatization of a public siderophore enables Pseudomonas aeruginosa to resist cheater invasion. Nat. Commu., 9, 1383.
      1. 金帆. (2018). 从“设计生命”到理解生命：对生命科学的哲学阐释. 文化纵横, 01:122-131.

PUBLICATIONS-2017

      1. Pu, L.#, Yang, S.#, Xia, A., Jin, F.* (2017). Optogenetics Manipulation Enables Prevention of Biofilm Formation of Engineered Pseudomonas aeruginosa on Surfaces. ACS Synth. Biol., 7, 200-208.
      1. 倪磊*，金震宇，杨帅，金帆 (2017). 铜绿假单胞菌蹭行运动单细胞分析方法的建立及应用. 生物工程学报, 33(9), 1611-1624.
      1. Zhang, R.#, Xia, A.#, Ni, L., Li, FX., Jin, Z., Yang, S., Jin, F.* (2017). Strong shear flow persister bacteria resist mechanical washing on the surfaces of various polymer materials. Adv. Biosyst., 1, 1700161.
      1. Brill-Karniely, Y., Jin, F., Wong, GCL., Frenkel, D., Dobnikar, J.* (2017). Emergence of complex behavior in pili-based motility in early stages of aeruginosa surface adaptation. Sci. Rep., 7, 45467.

PUBLICATIONS-2016

      1. Ni, L., Yang, S., Zhang, R., Jin, Z., Chen, H., Conrad, J.C.*, Jin, F.* (2016). Bacteria differently deploy type-IV pili on surfaces to adapt to nutrient availability. NPJ Biofilms Microbiomes, 2, 15029.
      1. Cai, J., Yue, Y., Wang, Y., Jin, Z., Jin, F., Wu, C.* (2016). Quantitative study of effects of free cationic chains on gene transfection in different intracellular stages. J Control Release, 238, 71.
      1. Lee, EY., Lee, CK., Jin, F., Lande, R., Curk, T., Frenkel, D., Dobnikar, J., Gilliet, M., Wong, GCL.* (2016). A review of immune amplification via ligand clustering by self-assembled liquid-crystalline DNA complexes. Colloid & Interface Sci., 232, 17.
      1. Gao, P., Yi, Z., Xing, X., Ngai, T.*, Jin, F.* (2016). The influence of additive-free particle spreading method on interactions between charged colloidal particles at an oil/water interface. Langmuir, 32, 4909-4916.

PUBLICATIONS (24-1) – 2015~